Package: ontologySimilarity 2.7

ontologySimilarity: Calculating Ontological Similarities

Calculate similarity between ontological terms and sets of ontological terms based on term information content and assess statistical significance of similarity in the context of a collection of terms sets - Greene et al. 2017 <doi:10.1093/bioinformatics/btw763>.

Authors:Daniel Greene

ontologySimilarity_2.7.tar.gz
ontologySimilarity_2.7.zip(r-4.5)ontologySimilarity_2.7.zip(r-4.4)ontologySimilarity_2.7.zip(r-4.3)
ontologySimilarity_2.7.tgz(r-4.4-x86_64)ontologySimilarity_2.7.tgz(r-4.4-arm64)ontologySimilarity_2.7.tgz(r-4.3-x86_64)ontologySimilarity_2.7.tgz(r-4.3-arm64)
ontologySimilarity_2.7.tar.gz(r-4.5-noble)ontologySimilarity_2.7.tar.gz(r-4.4-noble)
ontologySimilarity_2.7.tgz(r-4.4-emscripten)ontologySimilarity_2.7.tgz(r-4.3-emscripten)
ontologySimilarity.pdf |ontologySimilarity.html✨
ontologySimilarity/json (API)

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

16 exports 1.08 score 2 dependencies 1 dependents 2 mentions 66 scripts 370 downloads

Last updated 6 months agofrom:ab6e42b13c. Checks:OK: 9. Indexed: yes.

Exports:create_sim_indexdescendants_ICget_asym_sim_gridget_profile_simsget_simget_sim_gridget_sim_pget_sim_p_from_ontologyget_similarity_rank_matrixget_term_set_to_term_simsget_term_sim_matgroup_term_enrichmentlinresniksample_group_simsample_group_sim_from_ontology

Dependencies:ontologyIndexRcpp