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    "get_sim_grid",
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      "title": "Gene Ontology annotation of genes",
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      ],
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    {
      "page": "ontologySimilarity-package",
      "title": "Functions for Calculating Ontological Similarities",
      "topics": [
        "ontologySimilarity-package",
        "ontologySimilarity"
      ]
    },
    {
      "page": "create_sim_index",
      "title": "Create similarity index for list of term sets",
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        "create_sim_index"
      ]
    },
    {
      "page": "descendants_IC",
      "title": "Get information content based on number of descendants each term has",
      "topics": [
        "descendants_IC"
      ]
    },
    {
      "page": "gene_GO_terms",
      "title": "Gene Ontology annotation of genes",
      "topics": [
        "gene_GO_terms"
      ]
    },
    {
      "page": "get_asym_sim_grid",
      "title": "Get asymmetrical similarity matrix",
      "topics": [
        "get_asym_sim_grid"
      ]
    },
    {
      "page": "get_profile_sims",
      "title": "Get similarities of term sets to profile",
      "topics": [
        "get_profile_sims"
      ]
    },
    {
      "page": "get_sim",
      "title": "Calculate the group similarity of a set of row/column indices",
      "topics": [
        "get_sim",
        "get_sim.default",
        "get_sim.integer",
        "get_sim.matrix",
        "get_sim.numeric",
        "get_sim.sim_index"
      ]
    },
    {
      "page": "get_sim_grid",
      "title": "Get similarity matrix of pairwise similarities of term sets.",
      "topics": [
        "get_sim_grid"
      ]
    },
    {
      "page": "get_sim_p",
      "title": "Get similarity p-value",
      "topics": [
        "get_sim_p",
        "get_sim_p.default",
        "get_sim_p.integer",
        "get_sim_p.matrix",
        "get_sim_p.numeric",
        "get_sim_p.sim_index"
      ]
    },
    {
      "page": "get_sim_p_from_ontology",
      "title": "Get similarity p-value for subgroup term sets",
      "topics": [
        "get_sim_p_from_ontology"
      ]
    },
    {
      "page": "get_similarity_rank_matrix",
      "title": "Get matrix of similarity rank from similarity matrix",
      "topics": [
        "get_similarity_rank_matrix"
      ]
    },
    {
      "page": "get_term_set_to_term_sims",
      "title": "Get `term sets to term' similarity matrix",
      "topics": [
        "get_term_set_to_term_sims"
      ]
    },
    {
      "page": "get_term_sim_mat",
      "title": "Get term-term similarity matrix",
      "topics": [
        "get_term_sim_mat"
      ]
    },
    {
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      "title": "Gene Ontology terms information content.",
      "topics": [
        "GO_IC"
      ]
    },
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        "sample_group_sim.matrix",
        "sample_group_sim.numeric",
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    }
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