Package: gsEasy 1.5
gsEasy: Gene Set Enrichment Analysis in R
R-interface to C++ implementation of the rank/score permutation based GSEA test (Subramanian et al 2005 <doi:10.1073/pnas.0506580102>).
Authors:
gsEasy_1.5.tar.gz
gsEasy_1.5.zip(r-4.5)gsEasy_1.5.zip(r-4.4)gsEasy_1.5.zip(r-4.3)
gsEasy_1.5.tgz(r-4.4-x86_64)gsEasy_1.5.tgz(r-4.4-arm64)gsEasy_1.5.tgz(r-4.3-x86_64)gsEasy_1.5.tgz(r-4.3-arm64)
gsEasy_1.5.tar.gz(r-4.5-noble)gsEasy_1.5.tar.gz(r-4.4-noble)
gsEasy_1.5.tgz(r-4.4-emscripten)gsEasy_1.5.tgz(r-4.3-emscripten)
gsEasy.pdf |gsEasy.html✨
gsEasy/json (API)
NEWS
| # Install 'gsEasy' in R: |
| install.packages('gsEasy', repos = c('https://daniel-jg.r-universe.dev', 'https://cloud.r-project.org')) |
- GO_gene_sets - GO term gene sets
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 7 months agofrom:70aa0ab824. Checks:OK: 9. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 18 2024 |
| R-4.5-win-x86_64 | OK | Sep 18 2024 |
| R-4.5-linux-x86_64 | OK | Sep 18 2024 |
| R-4.4-win-x86_64 | OK | Sep 18 2024 |
| R-4.4-mac-x86_64 | OK | Sep 18 2024 |
| R-4.4-mac-aarch64 | OK | Sep 18 2024 |
| R-4.3-win-x86_64 | OK | Sep 18 2024 |
| R-4.3-mac-x86_64 | OK | Sep 18 2024 |
| R-4.3-mac-aarch64 | OK | Sep 18 2024 |
Exports:get_GO_gene_setsget_ontological_gene_setsgset
Dependencies:ontologyIndexRcpp
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Gene Set Enrichment Analysis in R | gsEasy-package gsEasy |
| Create list of gene sets defined by GO term annotation | get_GO_gene_sets |
| Create list of gene sets defined by ontological annotation | get_ontological_gene_sets |
| GO term gene sets | GO_gene_sets |
| Gene set enrichment test | gset |
