{
  "_id": "6ab0dc403d719c1f84083d5c",
  "Package": "gsEasy",
  "Type": "Package",
  "Title": "Gene Set Enrichment Analysis in R",
  "Version": "1.5",
  "Date": "2024-02-20",
  "Author": "Daniel Greene",
  "Maintainer": "Daniel Greene <dg333@cam.ac.uk>",
  "Description": "R-interface to C++ implementation of the rank/score\npermutation based GSEA test (Subramanian et al 2005 <doi:\n10.1073/pnas.0506580102>).",
  "License": "GPL (>= 2)",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.2.1",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-09-21 07:22:51 UTC",
    "User": "root"
  },
  "Repository": "https://daniel-jg.r-universe.dev",
  "Date/Publication": "2024-02-21 02:31:46 UTC",
  "RemoteUrl": "https://github.com/cran/gsEasy",
  "RemoteRef": "HEAD",
  "RemoteSha": "70aa0ab824f32cb177356d134cddacf27750793c",
  "_user": "daniel-jg",
  "_type": "src",
  "_file": "gsEasy_1.5.tar.gz",
  "_fileid": "https://r2.ropensci.org/4d3983c1950bd692450ef2a148a34b0b855d23651957d962b716ada42f187858",
  "_filesize": 715847,
  "_sha256": "4d3983c1950bd692450ef2a148a34b0b855d23651957d962b716ada42f187858",
  "_expires": "2026-12-30T07:26:54.000Z",
  "_created": "2026-09-21T07:22:51.000Z",
  "_published": "2026-09-21T07:26:56.189Z",
  "_jobs": [
    {
      "job": 106247580122,
      "time": 105,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10627020744"
    },
    {
      "job": 106247580104,
      "time": 166,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10627415136"
    },
    {
      "job": 106247580137,
      "time": 121,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10626249986"
    },
    {
      "job": 106247580070,
      "time": 116,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10627205381"
    },
    {
      "job": 106247580048,
      "time": 81,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10626945950"
    },
    {
      "job": 106247580066,
      "time": 177,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10627075760"
    },
    {
      "job": 106247580102,
      "time": 93,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10627125609"
    },
    {
      "job": 106247580040,
      "time": 180,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10627390173"
    },
    {
      "job": 106246873895,
      "time": 173,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10627155164"
    },
    {
      "job": 106247580029,
      "time": 111,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10626956000"
    },
    {
      "job": 106247580099,
      "time": 197,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10626881085"
    },
    {
      "job": 106247580082,
      "time": 115,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10626611979"
    },
    {
      "job": 106247580183,
      "time": 88,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10627140433"
    },
    {
      "job": 106247580151,
      "time": 174,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10626498701"
    },
    {
      "job": 106247580078,
      "time": 91,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10627250336"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650",
  "_status": "success",
  "_upstream": "https://github.com/cran/gsEasy",
  "_commit": {
    "id": "70aa0ab824f32cb177356d134cddacf27750793c",
    "author": "Daniel Greene <dg333@cam.ac.uk>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.5\n",
    "time": 1708482706
  },
  "_maintainer": {
    "name": "Daniel Greene",
    "email": "dg333@cam.ac.uk",
    "login": "daniel-jg",
    "description": "",
    "uuid": 25660818
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.0.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.11.2",
      "role": "Imports"
    },
    {
      "package": "ontologyIndex",
      "version": ">= 2.0",
      "role": "Imports"
    },
    {
      "package": "markdown",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "daniel-jg",
      "count": 5,
      "uuid": 25660818
    }
  ],
  "_userbio": {
    "uuid": 25660818,
    "type": "user",
    "name": "Daniel",
    "followers": 4
  },
  "_downloads": {
    "count": 323,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/gsEasy"
  },
  "_searchresults": 13,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/gsEasy.html",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt"
  ],
  "_realowner": "daniel-jg",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2016-01-11"
    },
    {
      "version": "1.1",
      "date": "2016-08-06"
    },
    {
      "version": "1.3",
      "date": "2018-05-23"
    },
    {
      "version": "1.4",
      "date": "2021-05-26"
    },
    {
      "version": "1.5",
      "date": "2024-02-20"
    }
  ],
  "_exports": [
    "get_GO_gene_sets",
    "get_ontological_gene_sets",
    "gset"
  ],
  "_datasets": [
    {
      "name": "GO_gene_sets",
      "title": "GO term gene sets",
      "object": "GO_gene_sets",
      "file": "GO_gene_sets.RData",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "gsEasy-package",
      "title": "Gene Set Enrichment Analysis in R",
      "topics": [
        "gsEasy-package",
        "gsEasy"
      ]
    },
    {
      "page": "get_GO_gene_sets",
      "title": "Create list of gene sets defined by GO term annotation",
      "topics": [
        "get_GO_gene_sets"
      ]
    },
    {
      "page": "get_ontological_gene_sets",
      "title": "Create list of gene sets defined by ontological annotation",
      "topics": [
        "get_ontological_gene_sets"
      ]
    },
    {
      "page": "GO_gene_sets",
      "title": "GO term gene sets",
      "topics": [
        "GO_gene_sets"
      ]
    },
    {
      "page": "gset",
      "title": "Gene set enrichment test",
      "topics": [
        "gset"
      ]
    }
  ],
  "_rundeps": [
    "ontologyIndex",
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "gsEasy-guide.Rmd",
      "filename": "gsEasy-guide.html",
      "title": "gsEasy",
      "author": "Daniel Greene",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Calculate p-values for enrichment of set",
        "Ontological annotations",
        "Gene Ontology (GO) annotations"
      ],
      "created": "2016-01-11 21:18:42",
      "modified": "2024-02-21 02:31:46",
      "commits": 4
    }
  ],
  "_score": 2.113943352306837,
  "_indexed": true,
  "_nocasepkg": "gseasy",
  "_universes": [
    "daniel-jg"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.5",
      "date": "2026-09-21T07:24:42.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/ba5d30a1fd662870242e1e37e538f8c104c8a050218a45474eaa3f3be1821225",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.5",
      "date": "2026-09-21T07:25:34.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/8ed49638137b6a6812d07405d8d172684d9dae59e261817d1f86413d3e4723f0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.5",
      "date": "2026-09-21T07:25:00.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/554ff3a07ddb99e34143ea637e1cab1357ba92ac95b059d5f3a8b6554b2ef835",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.5",
      "date": "2026-09-21T07:24:48.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/705671eda631b72fec16045810104a574031b1630307767ce129e88698f97105",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.5",
      "date": "2026-09-21T07:24:22.000Z",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/15288e93de735171a03a095ae8c53f7cbebaa21a8e66f1afaf08b3676881b624",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.5",
      "date": "2026-09-21T07:25:12.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/ba70642a7ced130f93982116c5ac06d964970b2985c796b72d29d8f47b18fdfc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.5",
      "date": "2026-09-21T07:24:30.000Z",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/1205aff62f1b9b0ce6d793c3de8af7ed05211ec7cab572c59a4279ebc9274436",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.5",
      "date": "2026-09-21T07:25:37.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/15ad30b89a4bbf0c02f0fb6e743007a812bc8bd6e2ba1f379cf7956a52b9672c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.5",
      "date": "2026-09-21T07:24:57.000Z",
      "arch": "emscripten",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/4506da9daaa8648778fae1adefa32fce2b1a2921ec7494fef61bc1294f776c3b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.5",
      "date": "2026-09-21T07:25:55.000Z",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/9c68f34d37f40c373849a17fc44deecd67b6db48e8cac00fa20cb05c7837dfe5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.5",
      "date": "2026-09-21T07:23:53.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/f036916d1b64fc59c04278bcd70935af87af0be09dcbe555a9cc1da4ee66cfef",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.5",
      "date": "2026-09-21T07:23:57.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/78be3a2ee637afb9c7d63cb1195dcae3ea9bb56563156a0593fb128f5657bccc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.5",
      "date": "2026-09-21T07:25:39.000Z",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/321d4565d57a8d1d65bd3b8f36bde3d3e0ac1828772d3726222ce578772c8856",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.5",
      "date": "2026-09-21T07:23:50.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/71e942f701bf843d8012496c7136ab3b3e444328c19b85450c3cec61df0ca8db",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/35572451650"
    }
  ]
}