{
  "_id": "6a4965393c3572b93bf7eb71",
  "Package": "gsEasy",
  "Type": "Package",
  "Title": "Gene Set Enrichment Analysis in R",
  "Version": "1.5",
  "Date": "2024-02-20",
  "Author": "Daniel Greene",
  "Maintainer": "Daniel Greene <dg333@cam.ac.uk>",
  "Description": "R-interface to C++ implementation of the rank/score\npermutation based GSEA test (Subramanian et al 2005 <doi:\n10.1073/pnas.0506580102>).",
  "License": "GPL (>= 2)",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.2.1",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-23 06:50:02 UTC",
    "User": "root"
  },
  "Repository": "https://daniel-jg.r-universe.dev",
  "Date/Publication": "2024-02-21 02:31:46 UTC",
  "RemoteUrl": "https://github.com/cran/gsEasy",
  "RemoteRef": "HEAD",
  "RemoteSha": "70aa0ab824f32cb177356d134cddacf27750793c",
  "_user": "daniel-jg",
  "_type": "src",
  "_file": "gsEasy_1.5.tar.gz",
  "_fileid": "https://r2.ropensci.org/b3e44b19231a02c5081fc213834ab702095bbee104c176a91c19b637195fb009",
  "_filesize": 715850,
  "_sha256": "b3e44b19231a02c5081fc213834ab702095bbee104c176a91c19b637195fb009",
  "_expires": "2026-10-12T19:55:35.000Z",
  "_created": "2026-06-23T06:50:02.000Z",
  "_published": "2026-07-04T19:55:37.233Z",
  "_jobs": [
    {
      "job": 85162296745,
      "time": 147,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7813504379"
    },
    {
      "job": 85162296827,
      "time": 104,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7813490795"
    },
    {
      "job": 85162296824,
      "time": 153,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813506534"
    },
    {
      "job": 85162296777,
      "time": 147,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813504216"
    },
    {
      "job": 85162296970,
      "time": 81,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7813483078"
    },
    {
      "job": 85162296813,
      "time": 147,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7813503362"
    },
    {
      "job": 85162296880,
      "time": 94,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813487433"
    },
    {
      "job": 85162296730,
      "time": 211,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813522751"
    },
    {
      "job": 85162296584,
      "time": 176,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813457331"
    },
    {
      "job": 85162296731,
      "time": 90,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813486172"
    },
    {
      "job": 85162296799,
      "time": 92,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7813486470"
    },
    {
      "job": 85162296808,
      "time": 81,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7813482872"
    },
    {
      "job": 85162296811,
      "time": 143,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813502392"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326",
  "_status": "success",
  "_upstream": "https://github.com/cran/gsEasy",
  "_commit": {
    "id": "70aa0ab824f32cb177356d134cddacf27750793c",
    "author": "Daniel Greene <dg333@cam.ac.uk>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.5\n",
    "time": 1708482706
  },
  "_maintainer": {
    "name": "Daniel Greene",
    "email": "dg333@cam.ac.uk",
    "login": "daniel-jg",
    "description": "",
    "uuid": 25660818
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.0.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.11.2",
      "role": "Imports"
    },
    {
      "package": "ontologyIndex",
      "version": ">= 2.0",
      "role": "Imports"
    },
    {
      "package": "markdown",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "daniel-jg",
      "count": 5,
      "uuid": 25660818
    }
  ],
  "_userbio": {
    "uuid": 25660818,
    "type": "user",
    "name": "Daniel",
    "followers": 4
  },
  "_downloads": {
    "count": 280,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/gsEasy"
  },
  "_searchresults": 16,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/gsEasy.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_realowner": "daniel-jg",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2016-01-11"
    },
    {
      "version": "1.1",
      "date": "2016-08-06"
    },
    {
      "version": "1.3",
      "date": "2018-05-23"
    },
    {
      "version": "1.4",
      "date": "2021-05-26"
    },
    {
      "version": "1.5",
      "date": "2024-02-20"
    }
  ],
  "_exports": [
    "get_GO_gene_sets",
    "get_ontological_gene_sets",
    "gset"
  ],
  "_datasets": [
    {
      "name": "GO_gene_sets",
      "title": "GO term gene sets",
      "object": "GO_gene_sets",
      "file": "GO_gene_sets.RData",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "gsEasy-package",
      "title": "Gene Set Enrichment Analysis in R",
      "topics": [
        "gsEasy-package",
        "gsEasy"
      ]
    },
    {
      "page": "get_GO_gene_sets",
      "title": "Create list of gene sets defined by GO term annotation",
      "topics": [
        "get_GO_gene_sets"
      ]
    },
    {
      "page": "get_ontological_gene_sets",
      "title": "Create list of gene sets defined by ontological annotation",
      "topics": [
        "get_ontological_gene_sets"
      ]
    },
    {
      "page": "GO_gene_sets",
      "title": "GO term gene sets",
      "topics": [
        "GO_gene_sets"
      ]
    },
    {
      "page": "gset",
      "title": "Gene set enrichment test",
      "topics": [
        "gset"
      ]
    }
  ],
  "_rundeps": [
    "ontologyIndex",
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "gsEasy-guide.Rmd",
      "filename": "gsEasy-guide.html",
      "title": "gsEasy",
      "author": "Daniel Greene",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Calculate p-values for enrichment of set",
        "Ontological annotations",
        "Gene Ontology (GO) annotations"
      ],
      "created": "2016-01-11 21:18:42",
      "modified": "2024-02-21 02:31:46",
      "commits": 4
    }
  ],
  "_score": 2.204119982655925,
  "_indexed": true,
  "_nocasepkg": "gseasy",
  "_universes": [
    "daniel-jg"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.5",
      "date": "2026-06-23T06:52:39.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/28b7ce03c903833580e1e2cde89509127054de8e61751f1278387868fdd527f5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.5",
      "date": "2026-06-23T06:51:53.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/42e18e1183ad479b3835ae7e88a0bf15ff0d5be3195b98bb7f8b6b1b7e74063d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.5",
      "date": "2026-06-23T06:52:46.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/7b4f4cc79a29437f344cc48a08bc2f825517758178cac7fd68c32cdc7addc284",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.5",
      "date": "2026-06-23T06:52:33.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/a4c18c616fe59e54747b5ac75f86a5e3db2ce3bf5f251ec16c7149c4182bae97",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.5",
      "date": "2026-06-23T06:51:32.000Z",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/daca7e16099d38d1a8b28c7ae613665f2166e2afffb3905b6ff1c1096bd269bc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.5",
      "date": "2026-06-23T06:52:23.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/ca9a73666b3e074fb33a6460a04ee2265c24ce76f222fbfeed23b26b4edaa6e5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.5",
      "date": "2026-06-23T06:51:41.000Z",
      "arch": "aarch64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/0857919de93f47a101afe4f002df0d76c2c1b6b0edfe87dce6d38bacbec7c22f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.5",
      "date": "2026-06-23T06:53:10.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/d0f7c6c5e2902aa376064bf7f6511b18ca7282e6fd4ecbcd4e426e9935dac53c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.5",
      "date": "2026-06-23T06:51:51.000Z",
      "arch": "emscripten",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/b8c35a5720c9cd63135e4de83d1aee7c60aa8e28704c3ac94b319b667dc042c9",
      "status": "success",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.5",
      "date": "2026-06-23T06:51:17.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/19303162c75d781879fb37c18ead1751245925ee787a854baf9f4b3b8db21707",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.5",
      "date": "2026-06-23T06:51:08.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/2eda95748f42d19cb4488a6d289d080fb2346cd4895573d0a92c65c495b4199f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.5",
      "date": "2026-06-23T06:51:56.000Z",
      "arch": "x86_64",
      "commit": "70aa0ab824f32cb177356d134cddacf27750793c",
      "fileid": "https://r2.ropensci.org/0859700023cd9f013318aacc8a304ec667febd1f3eae4a4d61c914fc5f454c9c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/daniel-jg/actions/runs/28007756326"
    }
  ]
}