Package: SimReg 3.4
SimReg: Similarity Regression
Similarity regression, evaluating the probability of association between sets of ontological terms and binary response vector. A no-association model is compared with one in which the log odds of a true response is linked to the semantic similarity between terms and a latent characteristic ontological profile - 'Phenotype Similarity Regression for Identifying the Genetic Determinants of Rare Diseases', Greene et al 2016 <doi:10.1016/j.ajhg.2016.01.008>.
Authors:
SimReg_3.4.tar.gz
SimReg_3.4.zip(r-4.5)SimReg_3.4.zip(r-4.4)SimReg_3.4.zip(r-4.3)
SimReg_3.4.tgz(r-4.4-x86_64)SimReg_3.4.tgz(r-4.4-arm64)SimReg_3.4.tgz(r-4.3-x86_64)SimReg_3.4.tgz(r-4.3-arm64)
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SimReg.pdf |SimReg.html✨
SimReg/json (API)
| # Install 'SimReg' in R: |
| install.packages('SimReg', repos = c('https://daniel-jg.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 months agofrom:d53275aea9. Checks:OK: 9. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 18 2024 |
| R-4.5-win-x86_64 | OK | Nov 18 2024 |
| R-4.5-linux-x86_64 | OK | Nov 18 2024 |
| R-4.4-win-x86_64 | OK | Nov 18 2024 |
| R-4.4-mac-x86_64 | OK | Nov 18 2024 |
| R-4.4-mac-aarch64 | OK | Nov 18 2024 |
| R-4.3-win-x86_64 | OK | Nov 18 2024 |
| R-4.3-mac-x86_64 | OK | Nov 18 2024 |
| R-4.3-mac-aarch64 | OK | Nov 18 2024 |
Exports:get_term_marginalsget_termslog_BFplot_term_marginalsposterior_predictionprob_associationsim_regsum_log_probsterm_marginals
Dependencies:BiocGenericsgenericsgraphontologyIndexontologyPlotontologySimilaritypaintmapRcppRgraphviz
