Package: SimReg
Type: Package
Title: Similarity Regression
Version: 3.4
Date: 2024-02-20
Encoding: UTF-8
Author: Daniel Greene
Maintainer: Daniel Greene <dg333@cam.ac.uk>
Description: Similarity regression, evaluating the probability of
        association between sets of ontological terms and binary
        response vector. A no-association model is compared with one in
        which the log odds of a true response is linked to the semantic
        similarity between terms and a latent characteristic
        ontological profile - 'Phenotype Similarity Regression for
        Identifying the Genetic Determinants of Rare Diseases', Greene
        et al 2016 <doi:10.1016/j.ajhg.2016.01.008>.
License: GPL (>= 2)
Imports: Rcpp (>= 0.11.1), ontologyIndex (>= 2.0), ontologySimilarity
        (>= 2.0), ontologyPlot
LinkingTo: Rcpp
Depends: R (>= 3.0.0)
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
RoxygenNote: 7.3.1
NeedsCompilation: yes
Packaged: 2026-06-01 10:00:10 UTC; root
Config/pak/sysreqs: zlib1g-dev
Repository: https://daniel-jg.r-universe.dev
Date/Publication: 2024-02-22 02:29:30 UTC
RemoteUrl: https://github.com/cran/SimReg
RemoteRef: HEAD
RemoteSha: d53275aea9f925d2fae1801411859b7cdf9e777f