Package: ontologyIndex 2.12

ontologyIndex: Reading Ontologies into R

Functions for reading ontologies into R as lists and manipulating sets of ontological terms - 'ontologyX: A suite of R packages for working with ontological data', Greene et al 2017 <doi:10.1093/bioinformatics/btw763>.

Authors:Daniel Greene <[email protected]>

ontologyIndex_2.12.tar.gz
ontologyIndex_2.12.zip(r-4.5)ontologyIndex_2.12.zip(r-4.4)ontologyIndex_2.12.zip(r-4.3)
ontologyIndex_2.12.tgz(r-4.4-any)ontologyIndex_2.12.tgz(r-4.3-any)
ontologyIndex_2.12.tar.gz(r-4.5-noble)ontologyIndex_2.12.tar.gz(r-4.4-noble)
ontologyIndex_2.12.tgz(r-4.4-emscripten)ontologyIndex_2.12.tgz(r-4.3-emscripten)
ontologyIndex.pdf |ontologyIndex.html✨
ontologyIndex/json (API)
NEWS

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

16 exports 6 stars 3.91 score 0 dependencies 26 dependents 3 mentions 265 scripts 1.5k downloads

Last updated 7 months agofrom:0c16aa8649. Checks:OK: 1 NOTE: 6. Indexed: yes.

Exports:checkexclude_descendantsget_ancestorsget_descendantsget_OBOget_ontologyget_relation_namesget_term_descendancy_matrixget_term_frequenciesget_term_info_contentget_term_propertyintersection_with_descendantsminimal_setontology_indexpropagate_relationsprune_descendants

Dependencies: